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Table 1 Characterization of VEGF polymorphisms, probes and primers sequences for genotyping by TaqMan real time PCR

From: Role of vascular endothelial growth factor polymorphisms (-2578C > A, -460 T > C, -1154G > A, +405G > C and +936C > T) in endometriosis: a case–control study with Brazilians

Identified SNP

TaqMan assays

Region

Probe [SNP]

Primer

rs699947

C_8311602_10

PR

GCCAGCTGTAGGCCAGACCCTGGCA[A/C]GATCTGGGTGGATAATCAGACTGAC

5′-GGATGGGGCTGACT AGGTAAGC-3′

5′-AGCCCCCTTTTCCT CCAAC-3′

rs833061

C_1647381_10

PR

GAGTGTGTGCGTGTGGGGTTGAGGG[C/T]GTTGGAGCGGGGAGAAGGCCAGGGG

5′-TGTGCGTGTGGGGTTGAGAG-3′

5′-TACGTGCGGACAGGGCCTGA-3′

rs1570360

C_1647379_10

PR

AGCCCGGGCCCGAGCCGCGTGTGGA[A/G]GGGCTGAGGCTCGCCTGTCCCCGCC

5′-TCCTGCTCCCTCCT CGCCAATG-3′

5′-GGCGGGGACAGGC GAGCATC-3′

rs2010963

C_8311614_10

5′-UTR

CGCGCGGGCGTGCGAGCAGCGAAAG[C/G]GACAGGGGCAAAGTGAGTGACCTGC

5′-TTGCTTGCCATTCCCCACTTGA-3′

5′-CCGAAGCGAGAACAGCCCAGAA-3′

rs3025039

C_16198794_10

3′-UTR

GCATTCCCGGGCGGGTGACCCAGCA[C/T]GGTCCCTCTTGGAATTGGATTCGCC

5′-AAGGAAGAGGAGAC TCTGCGC-3′

5′-TATGTGGGTGGGT GTGTCTACAG-3′

  1. PR is Promoter Region, 5′-UTR is 5′-Untranslated Region, 3′-UTR is 3′-Untranslated Region.